Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdh16O88338 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.77■□□□□ 0.6
Cdh16O88338 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cdh16O88338 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh16O88338 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh16O88338 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh16O88338 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh16O88338 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh16O88338 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdh16O88338 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Cdh16O88338 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdh16O88338 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.76■□□□□ 0.59
Cdh16O88338 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdh16O88338 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh16O88338 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdh16O88338 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdh16O88338 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh16O88338 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh16O88338 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh16O88338 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdh16O88338 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.74■□□□□ 0.59
Cdh16O88338 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh16O88338 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Gm40881-201ENSMUST00000223397 166 ntBASIC18.73■□□□□ 0.59
Cdh16O88338 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Cdh16O88338 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh16O88338 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdh16O88338 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdh16O88338 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdh16O88338 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.72■□□□□ 0.59
Cdh16O88338 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Cdh16O88338 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Cdh16O88338 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdh16O88338 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh16O88338 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdh16O88338 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh16O88338 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh16O88338 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh16O88338 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdh16O88338 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdh16O88338 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cdh16O88338 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.71■□□□□ 0.59
Cdh16O88338 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdh16O88338 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh16O88338 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh16O88338 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cdh16O88338 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Cdh16O88338 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdh16O88338 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdh16O88338 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Gm15820-201ENSMUST00000201566 728 ntBASIC18.7■□□□□ 0.58
Cdh16O88338 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdh16O88338 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.7■□□□□ 0.58
Cdh16O88338 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh16O88338 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms