Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Mir6236-201ENSMUST00000184437 123 ntBASIC15.16■□□□□ 0.02
Pde6dO55057 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.16■□□□□ 0.02
Pde6dO55057 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pde6dO55057 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.16■□□□□ 0.02
Pde6dO55057 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pde6dO55057 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.15■□□□□ 0.02
Pde6dO55057 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.15■□□□□ 0.02
Pde6dO55057 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.15■□□□□ 0.02
Pde6dO55057 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.15■□□□□ 0.02
Pde6dO55057 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6dO55057 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.14■□□□□ 0.01
Pde6dO55057 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pde6dO55057 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pde6dO55057 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pde6dO55057 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.14■□□□□ 0.01
Pde6dO55057 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pde6dO55057 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6dO55057 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pde6dO55057 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6dO55057 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.13■□□□□ 0.01
Pde6dO55057 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pde6dO55057 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.13■□□□□ 0.01
Pde6dO55057 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pde6dO55057 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pde6dO55057 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.12■□□□□ 0.01
Pde6dO55057 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.12■□□□□ 0.01
Pde6dO55057 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.12■□□□□ 0.01
Pde6dO55057 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pde6dO55057 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.12■□□□□ 0.01
Pde6dO55057 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Pde6dO55057 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6dO55057 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6dO55057 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pde6dO55057 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms