Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Matn3O35701 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.42■□□□□ 0.38
Matn3O35701 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Matn3O35701 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Matn3O35701 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Matn3O35701 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Matn3O35701 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Matn3O35701 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Matn3O35701 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Matn3O35701 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Matn3O35701 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.4■□□□□ 0.38
Matn3O35701 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Matn3O35701 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.4■□□□□ 0.38
Matn3O35701 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Matn3O35701 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Matn3O35701 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Matn3O35701 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Gm13238-201ENSMUST00000117655 780 ntBASIC17.39■□□□□ 0.37
Matn3O35701 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.39■□□□□ 0.37
Matn3O35701 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Matn3O35701 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.39■□□□□ 0.37
Matn3O35701 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Matn3O35701 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Matn3O35701 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Matn3O35701 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Matn3O35701 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn3O35701 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Matn3O35701 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.37■□□□□ 0.37
Matn3O35701 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Matn3O35701 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Matn3O35701 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn3O35701 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Mir6236-201ENSMUST00000184437 123 ntBASIC17.36■□□□□ 0.37
Matn3O35701 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.36■□□□□ 0.37
Matn3O35701 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.36■□□□□ 0.37
Matn3O35701 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Matn3O35701 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Matn3O35701 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Matn3O35701 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Matn3O35701 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Matn3O35701 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.35■□□□□ 0.37
Matn3O35701 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn3O35701 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn3O35701 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn3O35701 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn3O35701 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn3O35701 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms