Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf11aO35305 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf11aO35305 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf11aO35305 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfrsf11aO35305 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf11aO35305 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Gm15039-201ENSMUST00000118914 875 ntBASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11aO35305 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11aO35305 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.67■□□□□ 0.9
Tnfrsf11aO35305 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms