Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11bO08712 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11bO08712 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11bO08712 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Gm12251-201ENSMUST00000117893 792 ntBASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11bO08712 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Gm21956-201ENSMUST00000179946 522 ntBASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Tnfrsf11bO08712 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11bO08712 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11bO08712 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms