Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
B020004C17RikJ3QP07 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Dio3-201ENSMUST00000097228 1449 ntBASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
B020004C17RikJ3QP07 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
B020004C17RikJ3QP07 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
B020004C17RikJ3QP07 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
B020004C17RikJ3QP07 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.65■■□□□ 1.06
B020004C17RikJ3QP07 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
B020004C17RikJ3QP07 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
B020004C17RikJ3QP07 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
B020004C17RikJ3QP07 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
B020004C17RikJ3QP07 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Gm22325-201ENSMUST00000158904 308 ntBASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
B020004C17RikJ3QP07 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
B020004C17RikJ3QP07 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
B020004C17RikJ3QP07 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
B020004C17RikJ3QP07 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Gm6576-201ENSMUST00000169678 883 ntBASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
B020004C17RikJ3QP07 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
B020004C17RikJ3QP07 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
B020004C17RikJ3QP07 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
B020004C17RikJ3QP07 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
B020004C17RikJ3QP07 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Gm7977-201ENSMUST00000193787 748 ntBASIC21.58■■□□□ 1.05
B020004C17RikJ3QP07 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.58■■□□□ 1.04
B020004C17RikJ3QP07 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
B020004C17RikJ3QP07 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms