Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.67■□□□□ 0.26
Cldn20G5E8X0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn20G5E8X0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn20G5E8X0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn20G5E8X0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn20G5E8X0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cldn20G5E8X0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn20G5E8X0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms