Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cntnap3E9PY62 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cntnap3E9PY62 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cntnap3E9PY62 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cntnap3E9PY62 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cntnap3E9PY62 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.29■■□□□ 1
Cntnap3E9PY62 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cntnap3E9PY62 Gm15378-201ENSMUST00000121894 207 ntBASIC21.29■■□□□ 1
Cntnap3E9PY62 Gm18666-201ENSMUST00000190039 958 ntBASIC21.29■■□□□ 1
Cntnap3E9PY62 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cntnap3E9PY62 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.29■■□□□ 1
Cntnap3E9PY62 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cntnap3E9PY62 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.28■■□□□ 1
Cntnap3E9PY62 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cntnap3E9PY62 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
Cntnap3E9PY62 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cntnap3E9PY62 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cntnap3E9PY62 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.27■■□□□ 1
Cntnap3E9PY62 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.27■■□□□ 1
Cntnap3E9PY62 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cntnap3E9PY62 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cntnap3E9PY62 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cntnap3E9PY62 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cntnap3E9PY62 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cntnap3E9PY62 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Cntnap3E9PY62 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.27■□□□□ 0.99
Cntnap3E9PY62 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cntnap3E9PY62 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Gm5417-201ENSMUST00000079706 384 ntBASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap3E9PY62 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap3E9PY62 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Mir5122-201ENSMUST00000175004 89 ntBASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cntnap3E9PY62 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap3E9PY62 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap3E9PY62 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Cntnap3E9PY62 Gm6659-201ENSMUST00000174752 547 ntBASIC21.21■□□□□ 0.99
Cntnap3E9PY62 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cntnap3E9PY62 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap3E9PY62 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Cntnap3E9PY62 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.2■□□□□ 0.99
Cntnap3E9PY62 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cntnap3E9PY62 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cntnap3E9PY62 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms