Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hbb-bsA8DUK4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hbb-bsA8DUK4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hbb-bsA8DUK4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hbb-bsA8DUK4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hbb-bsA8DUK4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hbb-bsA8DUK4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hbb-bsA8DUK4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Fst-202ENSMUST00000223640 2612 ntBASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hbb-bsA8DUK4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hbb-bsA8DUK4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms