Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc38A3KMP2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ttc38A3KMP2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.9■□□□□ 0.94
Ttc38A3KMP2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ttc38A3KMP2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc38A3KMP2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc38A3KMP2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ttc38A3KMP2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ttc38A3KMP2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc38A3KMP2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms