Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tubb1A2AQ07 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tubb1A2AQ07 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tubb1A2AQ07 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Mir7075-201ENSMUST00000184187 82 ntBASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tubb1A2AQ07 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Gm43173-201ENSMUST00000202246 593 ntBASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tubb1A2AQ07 BC021767-201ENSMUST00000126387 1716 ntBASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tubb1A2AQ07 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb1A2AQ07 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb1A2AQ07 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tubb1A2AQ07 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Smad6-203ENSMUST00000179458 273 ntBASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.64■□□□□ 0.73
Tubb1A2AQ07 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb1A2AQ07 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tubb1A2AQ07 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tubb1A2AQ07 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms