Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CtcflA2APF3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CtcflA2APF3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CtcflA2APF3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.43■□□□□ 0.38
CtcflA2APF3 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.42■□□□□ 0.38
CtcflA2APF3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CtcflA2APF3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CtcflA2APF3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Gm5812-201ENSMUST00000061073 957 ntBASIC17.42■□□□□ 0.38
CtcflA2APF3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CtcflA2APF3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.42■□□□□ 0.38
CtcflA2APF3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CtcflA2APF3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CtcflA2APF3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CtcflA2APF3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.41■□□□□ 0.38
CtcflA2APF3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.41■□□□□ 0.38
CtcflA2APF3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CtcflA2APF3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CtcflA2APF3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CtcflA2APF3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CtcflA2APF3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.4■□□□□ 0.38
CtcflA2APF3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.4■□□□□ 0.38
CtcflA2APF3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CtcflA2APF3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtcflA2APF3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.4■□□□□ 0.38
CtcflA2APF3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CtcflA2APF3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CtcflA2APF3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CtcflA2APF3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
CtcflA2APF3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.39■□□□□ 0.37
CtcflA2APF3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.39■□□□□ 0.37
CtcflA2APF3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CtcflA2APF3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtcflA2APF3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CtcflA2APF3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CtcflA2APF3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CtcflA2APF3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtcflA2APF3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms