Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC30.94■■■□□ 2.54
Shroom2A2ALU4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shroom2A2ALU4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC30.93■■■□□ 2.54
Shroom2A2ALU4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shroom2A2ALU4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Shroom2A2ALU4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC30.93■■■□□ 2.54
Shroom2A2ALU4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shroom2A2ALU4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shroom2A2ALU4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shroom2A2ALU4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Gm11539-201ENSMUST00000119837 557 ntBASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Gm13436-201ENSMUST00000120418 567 ntBASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shroom2A2ALU4 Gm15847-201ENSMUST00000121417 1065 ntBASIC30.9■■■□□ 2.54
Shroom2A2ALU4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Shroom2A2ALU4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Shroom2A2ALU4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Shroom2A2ALU4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Shroom2A2ALU4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
Shroom2A2ALU4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Shroom2A2ALU4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Shroom2A2ALU4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Shroom2A2ALU4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Shroom2A2ALU4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Shroom2A2ALU4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Shroom2A2ALU4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Shroom2A2ALU4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC30.86■■■□□ 2.53
Shroom2A2ALU4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Shroom2A2ALU4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Shroom2A2ALU4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Shroom2A2ALU4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC30.86■■■□□ 2.53
Shroom2A2ALU4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Shroom2A2ALU4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Shroom2A2ALU4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Shroom2A2ALU4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Shroom2A2ALU4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
Shroom2A2ALU4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Shroom2A2ALU4 Gm42911-201ENSMUST00000199360 1630 ntBASIC30.83■■■□□ 2.53
Shroom2A2ALU4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Shroom2A2ALU4 Arhgef4-208ENSMUST00000211073 171 ntBASIC30.82■■■□□ 2.53
Shroom2A2ALU4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Shroom2A2ALU4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Gm44771-201ENSMUST00000206975 626 ntBASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Gm7461-201ENSMUST00000058918 827 ntBASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Shroom2A2ALU4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Shroom2A2ALU4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Shroom2A2ALU4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Shroom2A2ALU4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC30.8■■■□□ 2.52
Shroom2A2ALU4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Shroom2A2ALU4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Shroom2A2ALU4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Shroom2A2ALU4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Shroom2A2ALU4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Shroom2A2ALU4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Shroom2A2ALU4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms