Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm43566-201ENSMUST00000196851 808 ntBASIC17.84■□□□□ 0.45
IsxA1A546 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
IsxA1A546 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IsxA1A546 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IsxA1A546 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IsxA1A546 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IsxA1A546 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IsxA1A546 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
IsxA1A546 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IsxA1A546 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IsxA1A546 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.82■□□□□ 0.44
IsxA1A546 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IsxA1A546 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.82■□□□□ 0.44
IsxA1A546 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IsxA1A546 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.81■□□□□ 0.44
IsxA1A546 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IsxA1A546 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
IsxA1A546 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.81■□□□□ 0.44
IsxA1A546 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IsxA1A546 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IsxA1A546 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.8■□□□□ 0.44
IsxA1A546 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.8■□□□□ 0.44
IsxA1A546 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.8■□□□□ 0.44
IsxA1A546 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.8■□□□□ 0.44
IsxA1A546 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IsxA1A546 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IsxA1A546 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IsxA1A546 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
IsxA1A546 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.79■□□□□ 0.44
IsxA1A546 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
IsxA1A546 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.79■□□□□ 0.44
IsxA1A546 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IsxA1A546 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IsxA1A546 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IsxA1A546 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.78■□□□□ 0.44
IsxA1A546 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IsxA1A546 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.78■□□□□ 0.44
IsxA1A546 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IsxA1A546 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.78■□□□□ 0.44
IsxA1A546 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IsxA1A546 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IsxA1A546 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
IsxA1A546 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.77■□□□□ 0.44
IsxA1A546 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
IsxA1A546 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IsxA1A546 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
IsxA1A546 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IsxA1A546 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
IsxA1A546 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IsxA1A546 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.76■□□□□ 0.43
IsxA1A546 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IsxA1A546 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms