Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim17A0A504 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim17A0A504 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim17A0A504 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim17A0A504 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.43■□□□□ 0.38
Smim17A0A504 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smim17A0A504 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim17A0A504 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smim17A0A504 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smim17A0A504 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Smim17A0A504 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Smim17A0A504 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
Smim17A0A504 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.41■□□□□ 0.38
Smim17A0A504 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.41■□□□□ 0.38
Smim17A0A504 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Smim17A0A504 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.41■□□□□ 0.38
Smim17A0A504 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smim17A0A504 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smim17A0A504 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smim17A0A504 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.4■□□□□ 0.38
Smim17A0A504 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.4■□□□□ 0.38
Smim17A0A504 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smim17A0A504 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim17A0A504 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Smim17A0A504 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smim17A0A504 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.39■□□□□ 0.37
Smim17A0A504 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim17A0A504 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smim17A0A504 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Smim17A0A504 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Smim17A0A504 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.38■□□□□ 0.37
Smim17A0A504 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smim17A0A504 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim17A0A504 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.37■□□□□ 0.37
Smim17A0A504 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smim17A0A504 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.37■□□□□ 0.37
Smim17A0A504 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smim17A0A504 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim17A0A504 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smim17A0A504 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms