Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.12□□□□□ -0.47
Igkv3-5A0A140T8M6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm15546-201ENSMUST00000122095 826 ntBASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm9870-201ENSMUST00000063874 645 ntBASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv3-5A0A140T8M6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm43530-201ENSMUST00000195920 274 ntBASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv3-5A0A140T8M6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv3-5A0A140T8M6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.08□□□□□ -0.47
Igkv3-5A0A140T8M6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms