Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm42778-201ENSMUST00000199644 553 ntBASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn2aA0A0J9YTW6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 AV356131-201ENSMUST00000206201 750 ntBASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn2aA0A0J9YTW6 Gm27405-201ENSMUST00000184201 112 ntBASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn2aA0A0J9YTW6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scn2aA0A0J9YTW6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn2aA0A0J9YTW6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn2aA0A0J9YTW6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn2aA0A0J9YTW6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn2aA0A0J9YTW6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.62■□□□□ 0.41
Scn2aA0A0J9YTW6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn2aA0A0J9YTW6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn2aA0A0J9YTW6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scn2aA0A0J9YTW6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.6■□□□□ 0.41
Scn2aA0A0J9YTW6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms