Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-2A0A0G2JF93 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.66□□□□□ -0.38
Trav13n-2A0A0G2JF93 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms