Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm15546-201ENSMUST00000122095 826 ntBASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trbv16A0A0B4J1H3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Trbv16A0A0B4J1H3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv16A0A0B4J1H3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv16A0A0B4J1H3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv16A0A0B4J1H3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv16A0A0B4J1H3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv16A0A0B4J1H3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms