Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 AA386476-201ENSMUST00000098781 1665 ntBASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbc1A0A0A6YWV4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbc1A0A0A6YWV4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbc1A0A0A6YWV4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Trbc1A0A0A6YWV4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbc1A0A0A6YWV4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbc1A0A0A6YWV4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbc1A0A0A6YWV4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm18284-201ENSMUST00000172604 624 ntBASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbc1A0A0A6YWV4 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms