Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-2A0A075B649 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-2A0A075B649 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13-2A0A075B649 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Gm43566-201ENSMUST00000196851 808 ntBASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-2A0A075B649 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Mir6236-201ENSMUST00000184437 123 ntBASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-2A0A075B649 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Gm5921-201ENSMUST00000075898 882 ntBASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-2A0A075B649 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-2A0A075B649 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms