Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav14n-3A0A075B645 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav14n-3A0A075B645 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav14n-3A0A075B645 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav14n-3A0A075B645 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav14n-3A0A075B645 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Gm7143-201ENSMUST00000222811 859 ntBASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav14n-3A0A075B645 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav14n-3A0A075B645 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms