Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm7417-201ENSMUST00000192950 473 ntBASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms