Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.56□□□□□ -0.08
Trav7n-4A0A075B620 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7n-4A0A075B620 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Mir6236-201ENSMUST00000184437 123 ntBASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7n-4A0A075B620 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7n-4A0A075B620 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-4A0A075B620 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-4A0A075B620 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-4A0A075B620 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms