Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4n-4A0A075B615 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4n-4A0A075B615 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4n-4A0A075B615 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4n-4A0A075B615 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav4n-4A0A075B615 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav4n-4A0A075B615 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.33□□□□□ -0.27
Trav4n-4A0A075B615 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Gm6821-201ENSMUST00000107540 542 ntBASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4n-4A0A075B615 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms