Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-6A0A075B603 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-6A0A075B603 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-6A0A075B603 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-6A0A075B603 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-6A0A075B603 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-6A0A075B603 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Gm15820-201ENSMUST00000201566 728 ntBASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-6A0A075B603 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6-6A0A075B603 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6-6A0A075B603 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Gm7417-201ENSMUST00000192950 473 ntBASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-6A0A075B603 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms