Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.15■□□□□ 0.82
Scn5aQ9JJV9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn5aQ9JJV9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn5aQ9JJV9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn5aQ9JJV9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Scn5aQ9JJV9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn5aQ9JJV9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn5aQ9JJV9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scn5aQ9JJV9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn5aQ9JJV9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn5aQ9JJV9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Rab3c-203ENSMUST00000224180 967 ntBASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn5aQ9JJV9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn5aQ9JJV9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.1■□□□□ 0.81
Scn5aQ9JJV9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn5aQ9JJV9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn5aQ9JJV9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn5aQ9JJV9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Scn5aQ9JJV9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn5aQ9JJV9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn5aQ9JJV9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn5aQ9JJV9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn5aQ9JJV9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn5aQ9JJV9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn5aQ9JJV9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn5aQ9JJV9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn5aQ9JJV9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn5aQ9JJV9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn5aQ9JJV9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn5aQ9JJV9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn5aQ9JJV9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms