Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup50Q9JIH2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup50Q9JIH2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup50Q9JIH2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup50Q9JIH2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nup50Q9JIH2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup50Q9JIH2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup50Q9JIH2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup50Q9JIH2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.36■□□□□ 0.85
Nup50Q9JIH2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup50Q9JIH2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup50Q9JIH2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup50Q9JIH2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup50Q9JIH2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.33■□□□□ 0.85
Nup50Q9JIH2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup50Q9JIH2 Gm43137-201ENSMUST00000198052 594 ntBASIC20.33■□□□□ 0.85
Nup50Q9JIH2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nup50Q9JIH2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup50Q9JIH2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.33■□□□□ 0.84
Nup50Q9JIH2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms