Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Gm9847-201ENSMUST00000052528 599 ntBASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim39Q9ESN2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.89■□□□□ 0.45
Trim39Q9ESN2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim39Q9ESN2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim39Q9ESN2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim39Q9ESN2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim39Q9ESN2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim39Q9ESN2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim39Q9ESN2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim39Q9ESN2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim39Q9ESN2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Trim39Q9ESN2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim39Q9ESN2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms