Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Gm43173-201ENSMUST00000202246 593 ntBASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Rtn3Q9ES97 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtn3Q9ES97 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtn3Q9ES97 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rtn3Q9ES97 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Gm12251-201ENSMUST00000117893 792 ntBASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.44■□□□□ 0.86
Rtn3Q9ES97 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn3Q9ES97 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn3Q9ES97 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Rtn3Q9ES97 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Gm18284-201ENSMUST00000172604 624 ntBASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Gm8495-201ENSMUST00000188740 694 ntBASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn3Q9ES97 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms