Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sh2d4aQ9D7V1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh2d4aQ9D7V1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Etf1-202ENSMUST00000180351 108 ntBASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4aQ9D7V1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4aQ9D7V1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4aQ9D7V1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4aQ9D7V1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Sh2d4aQ9D7V1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4aQ9D7V1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4aQ9D7V1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4aQ9D7V1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4aQ9D7V1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4aQ9D7V1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms