Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Gm7332-201ENSMUST00000118351 454 ntBASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a3Q9D554 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a3Q9D554 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3a3Q9D554 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3a3Q9D554 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Sf3a3Q9D554 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3a3Q9D554 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Sf3a3Q9D554 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3a3Q9D554 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3a3Q9D554 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms