Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Gm38205-201ENSMUST00000192243 258 ntBASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubgcp4Q9D4F8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tubgcp4Q9D4F8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Gm37179-201ENSMUST00000194862 823 ntBASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubgcp4Q9D4F8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Gm29257-201ENSMUST00000186115 639 ntBASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubgcp4Q9D4F8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.58■□□□□ 0.89
Tubgcp4Q9D4F8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubgcp4Q9D4F8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubgcp4Q9D4F8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubgcp4Q9D4F8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubgcp4Q9D4F8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubgcp4Q9D4F8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubgcp4Q9D4F8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubgcp4Q9D4F8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubgcp4Q9D4F8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubgcp4Q9D4F8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubgcp4Q9D4F8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tubgcp4Q9D4F8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.53■□□□□ 0.88
Tubgcp4Q9D4F8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tubgcp4Q9D4F8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.53■□□□□ 0.88
Tubgcp4Q9D4F8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubgcp4Q9D4F8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms