Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Snrnp48Q9D361 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Snrnp48Q9D361 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp48Q9D361 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp48Q9D361 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Snrnp48Q9D361 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp48Q9D361 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Gm43060-201ENSMUST00000200621 289 ntBASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp48Q9D361 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Gm40848-201ENSMUST00000221998 324 ntBASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snrnp48Q9D361 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snrnp48Q9D361 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Snrnp48Q9D361 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Snrnp48Q9D361 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snrnp48Q9D361 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms