Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shmt2Q9CZN7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Shmt2Q9CZN7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Shmt2Q9CZN7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shmt2Q9CZN7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shmt2Q9CZN7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shmt2Q9CZN7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Shmt2Q9CZN7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shmt2Q9CZN7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt2Q9CZN7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt2Q9CZN7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt2Q9CZN7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms