Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snf8Q9CZ28 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snf8Q9CZ28 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snf8Q9CZ28 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snf8Q9CZ28 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 BC021767-201ENSMUST00000126387 1716 ntBASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snf8Q9CZ28 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snf8Q9CZ28 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Snf8Q9CZ28 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snf8Q9CZ28 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.79■□□□□ 0.76
Snf8Q9CZ28 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.79■□□□□ 0.76
Snf8Q9CZ28 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snf8Q9CZ28 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snf8Q9CZ28 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snf8Q9CZ28 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Gm22238-201ENSMUST00000175222 88 ntBASIC19.75■□□□□ 0.75
Snf8Q9CZ28 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Gm45102-201ENSMUST00000207427 857 ntBASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.75■□□□□ 0.75
Snf8Q9CZ28 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Rps24-207ENSMUST00000224568 714 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms