Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd1lQ9CXF7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Mir6538-201ENSMUST00000183713 110 ntBASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd1lQ9CXF7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd1lQ9CXF7 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Gm43530-201ENSMUST00000195920 274 ntBASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd1lQ9CXF7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chd1lQ9CXF7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chd1lQ9CXF7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 AA386476-201ENSMUST00000098781 1665 ntBASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd1lQ9CXF7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd1lQ9CXF7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Gm43566-201ENSMUST00000196851 808 ntBASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd1lQ9CXF7 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms