Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Retreg3Q9CQV4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Retreg3Q9CQV4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Retreg3Q9CQV4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg3Q9CQV4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retreg3Q9CQV4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg3Q9CQV4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.38■□□□□ 0.69
Retreg3Q9CQV4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg3Q9CQV4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Gm43060-201ENSMUST00000200621 289 ntBASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg3Q9CQV4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.36■□□□□ 0.69
Retreg3Q9CQV4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Gm29257-201ENSMUST00000186115 639 ntBASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retreg3Q9CQV4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retreg3Q9CQV4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg3Q9CQV4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg3Q9CQV4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Retreg3Q9CQV4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retreg3Q9CQV4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retreg3Q9CQV4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Gm27801-201ENSMUST00000184174 223 ntBASIC19.32■□□□□ 0.68
Retreg3Q9CQV4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms