Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cotl1Q9CQI6 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.04■□□□□ -0
Cotl1Q9CQI6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.04■□□□□ -0
Cotl1Q9CQI6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cotl1Q9CQI6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cotl1Q9CQI6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cotl1Q9CQI6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cotl1Q9CQI6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cotl1Q9CQI6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cotl1Q9CQI6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cotl1Q9CQI6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Fst-202ENSMUST00000223640 2612 ntBASIC15□□□□□ -0.01
Cotl1Q9CQI6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15□□□□□ -0.01
Cotl1Q9CQI6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15□□□□□ -0.01
Cotl1Q9CQI6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cotl1Q9CQI6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms