Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
H2afb1Q9CQ70 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1Q9CQ70 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1Q9CQ70 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
H2afb1Q9CQ70 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
H2afb1Q9CQ70 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
H2afb1Q9CQ70 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Spcs1-204ENSMUST00000226782 949 ntBASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb1Q9CQ70 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb1Q9CQ70 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb1Q9CQ70 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.67■□□□□ 0.1
H2afb1Q9CQ70 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1Q9CQ70 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1Q9CQ70 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1Q9CQ70 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1Q9CQ70 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms