Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Gm12251-201ENSMUST00000117893 792 ntBASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim11Q99PQ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim11Q99PQ2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim11Q99PQ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim11Q99PQ2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Trim11Q99PQ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim11Q99PQ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim11Q99PQ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim11Q99PQ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim11Q99PQ2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim11Q99PQ2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.87■■□□□ 1.09
Trim11Q99PQ2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim11Q99PQ2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.85■■□□□ 1.09
Trim11Q99PQ2 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim11Q99PQ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim11Q99PQ2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim11Q99PQ2 Mir7075-201ENSMUST00000184187 82 ntBASIC21.84■■□□□ 1.09
Trim11Q99PQ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim11Q99PQ2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim11Q99PQ2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Trim11Q99PQ2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.84■■□□□ 1.09
Trim11Q99PQ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim11Q99PQ2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim11Q99PQ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim11Q99PQ2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim11Q99PQ2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Trim11Q99PQ2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms