Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Pbx4Q99NE9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx4Q99NE9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx4Q99NE9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx4Q99NE9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx4Q99NE9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Pbx4Q99NE9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pbx4Q99NE9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Gm44549-201ENSMUST00000208351 577 ntBASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.35■■□□□ 1.01
Pbx4Q99NE9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pbx4Q99NE9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Gm13158-201ENSMUST00000122007 736 ntBASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Gm30025-201ENSMUST00000218555 728 ntBASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.33■■□□□ 1.01
Pbx4Q99NE9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.33■■□□□ 1
Pbx4Q99NE9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pbx4Q99NE9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Pbx4Q99NE9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.32■■□□□ 1
Pbx4Q99NE9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pbx4Q99NE9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pbx4Q99NE9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.31■■□□□ 1
Pbx4Q99NE9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pbx4Q99NE9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pbx4Q99NE9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Pbx4Q99NE9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Pbx4Q99NE9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 Gm9103-201ENSMUST00000119371 405 ntBASIC21.3■■□□□ 1
Pbx4Q99NE9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.3■■□□□ 1
Pbx4Q99NE9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Pbx4Q99NE9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pbx4Q99NE9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pbx4Q99NE9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Gm13559-201ENSMUST00000120476 863 ntBASIC21.29■■□□□ 1
Pbx4Q99NE9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.29■■□□□ 1
Pbx4Q99NE9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pbx4Q99NE9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms