Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tlr3Q99MB1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tlr3Q99MB1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Gm29257-201ENSMUST00000186115 639 ntBASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlr3Q99MB1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tlr3Q99MB1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr3Q99MB1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr3Q99MB1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tlr3Q99MB1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.65■□□□□ 0.9
Tlr3Q99MB1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlr3Q99MB1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr3Q99MB1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlr3Q99MB1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.64■□□□□ 0.89
Tlr3Q99MB1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlr3Q99MB1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tlr3Q99MB1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlr3Q99MB1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tlr3Q99MB1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms