Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.49■□□□□ 0.87
Clp1Q99LI9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clp1Q99LI9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.49■□□□□ 0.87
Clp1Q99LI9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clp1Q99LI9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Gm22325-201ENSMUST00000158904 308 ntBASIC20.47■□□□□ 0.87
Clp1Q99LI9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clp1Q99LI9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clp1Q99LI9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.45■□□□□ 0.86
Clp1Q99LI9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.45■□□□□ 0.86
Clp1Q99LI9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Clp1Q99LI9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.44■□□□□ 0.86
Clp1Q99LI9 Mir6982-201ENSMUST00000184354 68 ntBASIC20.44■□□□□ 0.86
Clp1Q99LI9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Clp1Q99LI9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.43■□□□□ 0.86
Clp1Q99LI9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Clp1Q99LI9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Clp1Q99LI9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clp1Q99LI9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clp1Q99LI9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.42■□□□□ 0.86
Clp1Q99LI9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clp1Q99LI9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms