Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Gm43566-201ENSMUST00000196851 808 ntBASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp1aQ921W0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Gm13238-201ENSMUST00000117655 780 ntBASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp1aQ921W0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp1aQ921W0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Chmp1aQ921W0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp1aQ921W0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Chmp1aQ921W0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.96■□□□□ 0.3
Chmp1aQ921W0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Gm10232-201ENSMUST00000089221 720 ntBASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp1aQ921W0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp1aQ921W0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chmp1aQ921W0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp1aQ921W0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp1aQ921W0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp1aQ921W0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp1aQ921W0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chmp1aQ921W0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms