Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TraipQ8VIG6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
TraipQ8VIG6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TraipQ8VIG6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TraipQ8VIG6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
TraipQ8VIG6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.56■□□□□ 0.88
TraipQ8VIG6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TraipQ8VIG6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TraipQ8VIG6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TraipQ8VIG6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Gm6420-201ENSMUST00000193885 723 ntBASIC20.53■□□□□ 0.88
TraipQ8VIG6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TraipQ8VIG6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TraipQ8VIG6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.52■□□□□ 0.88
TraipQ8VIG6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.52■□□□□ 0.88
TraipQ8VIG6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TraipQ8VIG6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TraipQ8VIG6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.51■□□□□ 0.87
TraipQ8VIG6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Gm6365-201ENSMUST00000054711 744 ntBASIC20.51■□□□□ 0.87
TraipQ8VIG6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TraipQ8VIG6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.5■□□□□ 0.87
TraipQ8VIG6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Gm12441-201ENSMUST00000121806 588 ntBASIC20.5■□□□□ 0.87
TraipQ8VIG6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.5■□□□□ 0.87
TraipQ8VIG6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Gm4968-201ENSMUST00000071458 858 ntBASIC20.5■□□□□ 0.87
TraipQ8VIG6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TraipQ8VIG6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TraipQ8VIG6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TraipQ8VIG6 Gm13148-201ENSMUST00000118892 745 ntBASIC20.49■□□□□ 0.87
TraipQ8VIG6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.49■□□□□ 0.87
TraipQ8VIG6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TraipQ8VIG6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TraipQ8VIG6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TraipQ8VIG6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TraipQ8VIG6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms