Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf8Q8VC56 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf8Q8VC56 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Mir6236-201ENSMUST00000184437 123 ntBASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf8Q8VC56 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf8Q8VC56 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf8Q8VC56 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Gm27454-201ENSMUST00000185090 204 ntBASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf8Q8VC56 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf8Q8VC56 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf8Q8VC56 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms