Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alms1Q8K4E0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alms1Q8K4E0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alms1Q8K4E0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alms1Q8K4E0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alms1Q8K4E0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.97■□□□□ 0.63
Alms1Q8K4E0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alms1Q8K4E0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alms1Q8K4E0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Alms1Q8K4E0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Alms1Q8K4E0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alms1Q8K4E0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.94■□□□□ 0.62
Alms1Q8K4E0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Gm38205-201ENSMUST00000192243 258 ntBASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Gm13534-201ENSMUST00000121169 513 ntBASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Alms1Q8K4E0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Gm10812-201ENSMUST00000099864 546 ntBASIC18.92■□□□□ 0.62
Alms1Q8K4E0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.92■□□□□ 0.62
Alms1Q8K4E0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.91■□□□□ 0.62
Alms1Q8K4E0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms