Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Spcs1-204ENSMUST00000226782 949 ntBASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cchcr1Q8K2I2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cchcr1Q8K2I2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cchcr1Q8K2I2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Gm43137-201ENSMUST00000198052 594 ntBASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cchcr1Q8K2I2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cchcr1Q8K2I2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Cchcr1Q8K2I2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cchcr1Q8K2I2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Gm13241-201ENSMUST00000094493 780 ntBASIC22.69■■□□□ 1.22
Cchcr1Q8K2I2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.68■■□□□ 1.22
Cchcr1Q8K2I2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.67■■□□□ 1.22
Cchcr1Q8K2I2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms