Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot3Q8K0V4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Gm13238-201ENSMUST00000117655 780 ntBASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cnot3Q8K0V4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cnot3Q8K0V4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cnot3Q8K0V4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cnot3Q8K0V4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cnot3Q8K0V4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.05■□□□□ 0.48
Cnot3Q8K0V4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Gm40881-201ENSMUST00000223397 166 ntBASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cnot3Q8K0V4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Gm5921-201ENSMUST00000075898 882 ntBASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.03■□□□□ 0.48
Cnot3Q8K0V4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms